IL_3J74_142
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUUG*CUAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J74_142 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.3235
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
3J74|1|S2|C|803
3J74|1|S2|U|804
3J74|1|S2|U|805
3J74|1|S2|U|806
3J74|1|S2|G|807
*
3J74|1|S2|C|856
3J74|1|S2|U|857
3J74|1|S2|A|858
3J74|1|S2|G|859
3J74|1|S2|G|860
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- Ribosomal protein eS4
- Chain SH
- Ribosomal protein eS7
- Chain SL
- Ribosomal protein uS17
- Chain SW
- Ribosomal protein uS8
Coloring options: