IL_3J77_003
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 3J77|1|1S|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_003 not in the Motif Atlas
- Geometric match to IL_4V88_386
- Geometric discrepancy: 0.2188
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
3J77|1|1S|U|37
3J77|1|1S|C|38
3J77|1|1S|A|39
3J77|1|1S|A|40
3J77|1|1S|A|41
*
3J77|1|1S|U|466
3J77|1|1S|G|467
3J77|1|1S|A|468
3J77|1|1S|C|469
3J77|1|1S|A|470
3J77|1|1S|A|471
Current chains
- Chain 1S
- 18S ribosomal RNA
Nearby chains
- Chain 24
- 40S ribosomal protein S24
- Chain S4
- 40S ribosomal protein S4
- Chain S9
- 40S ribosomal protein S9
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