IL_3J77_134
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UUAAG*CUAUA
- Length
- 10 nucleotides
- Bulged bases
- 3J77|1|2S|U|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_134 not in the Motif Atlas
- Homologous match to IL_8C3A_051
- Geometric discrepancy: 0.2411
- The information below is about IL_8C3A_051
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
3J77|1|2S|U|1167
3J77|1|2S|U|1168
3J77|1|2S|A|1169
3J77|1|2S|A|1170
3J77|1|2S|G|1171
*
3J77|1|2S|C|1328
3J77|1|2S|U|1329
3J77|1|2S|A|1330
3J77|1|2S|U|1331
3J77|1|2S|A|1332
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 5S
- 5S ribosomal RNA; 5S rRNA
- Chain 68
- 60S ribosomal protein L18
- Chain 82
- 60S ribosomal protein L32
- Chain 83
- 60S ribosomal protein L33
- Chain L7
- 60S ribosomal protein L7
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