IL_3J77_149
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- CUAAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 3J77|1|2S|A|1588, 3J77|1|2S|A|1589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_149 not in the Motif Atlas
- Homologous match to IL_8C3A_067
- Geometric discrepancy: 0.1796
- The information below is about IL_8C3A_067
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
3J77|1|2S|C|1532
3J77|1|2S|U|1533
3J77|1|2S|A|1534
3J77|1|2S|A|1535
3J77|1|2S|G|1536
*
3J77|1|2S|C|1585
3J77|1|2S|G|1586
3J77|1|2S|A|1587
3J77|1|2S|A|1588
3J77|1|2S|A|1589
3J77|1|2S|G|1590
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 84
- 60S ribosomal protein L34
- Chain 87
- 60S ribosomal protein L37
- Chain 89
- 60S ribosomal protein L39
- Chain 8S
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L2
- 60S ribosomal protein L2
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