IL_3J77_158
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 3J77|1|2S|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_158 not in the Motif Atlas
- Homologous match to IL_5TBW_071
- Geometric discrepancy: 0.1767
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3J77|1|2S|U|1694
3J77|1|2S|U|1695
3J77|1|2S|A|1696
3J77|1|2S|A|1697
3J77|1|2S|C|1698
*
3J77|1|2S|G|1747
3J77|1|2S|G|1748
3J77|1|2S|A|1749
3J77|1|2S|A|1750
3J77|1|2S|G|1751
3J77|1|2S|A|1752
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 84
- 60S ribosomal protein L34
- Chain 88
- 60S ribosomal protein L38
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