IL_3J77_237
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- UAUAAC*GCUAAUA
- Length
- 13 nucleotides
- Bulged bases
- 3J77|1|1S|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_237 not in the Motif Atlas
- Geometric match to IL_4LFB_009
- Geometric discrepancy: 0.2731
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_12745.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 1
Unit IDs
3J77|1|1S|U|144
3J77|1|1S|A|145
3J77|1|1S|U|146
3J77|1|1S|A|147
3J77|1|1S|A|148
3J77|1|1S|C|149
*
3J77|1|1S|G|165
3J77|1|1S|C|166
3J77|1|1S|U|167
3J77|1|1S|A|168
3J77|1|1S|A|169
3J77|1|1S|U|170
3J77|1|1S|A|171
Current chains
- Chain 1S
- 18S ribosomal RNA
Nearby chains
- Chain 24
- 40S ribosomal protein S24
- Chain 74
- 60S ribosomal protein L24
- Chain S6
- 40S ribosomal protein S6
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