IL_3J79_001
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUU*AC
- Length
- 5 nucleotides
- Bulged bases
- 3J79|1|A|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57598.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 400
Unit IDs
3J79|1|A|G|13
3J79|1|A|U|14
3J79|1|A|U|15
*
3J79|1|C|A|151
3J79|1|C|C|152
Current chains
- Chain A
- 28S ribosomal RNA
- Chain C
- 5.8S ribosomal RNA
Nearby chains
- Chain J
- 60S ribosomal protein eL8
- Chain P
- 60S ribosomal protein eL15
- Chain Y
- 60S ribosomal protein uL23
Coloring options: