IL_3J79_017
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUUA*UUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 116
Unit IDs
3J79|1|A|A|519
3J79|1|A|U|520
3J79|1|A|U|521
3J79|1|A|A|522
*
3J79|1|A|U|633
3J79|1|A|U|634
3J79|1|A|U|635
3J79|1|A|U|636
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain 5
- 60S ribosomal protein uL30
- Chain 9
- 60S ribosomal protein eL33
- Chain F
- 60S ribosomal protein uL4
- Chain I
- 60S ribosomal protein eL6
Coloring options: