IL_3J7P_056

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGUAA*UAAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24236.1

Basepair signature

cWW-bif-R-cSH-tWH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

3J7P|1|5|C|1732
3J7P|1|5|G|1733
3J7P|1|5|G|1734
3J7P|1|5|U|1735
3J7P|1|5|A|1736
3J7P|1|5|A|1737
*
3J7P|1|5|U|1792
3J7P|1|5|A|1793
3J7P|1|5|A|1794
3J7P|1|5|A|1795
3J7P|1|5|U|1796
3J7P|1|5|G|1797

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

Ribosomal protein uL30

Chain I

Ribosomal protein uL16

Chain S

Ribosomal protein eL20

Chain T

Ribosomal protein eL21