Motif IL_24236.1 Version IL_24236.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-4 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J7P_056 | 3J7P | 0.0000 | 0 | 5 | LSU rRNA | C | 1732 | G | 1733 | G | 1734 | U | 1735 | A | 1736 | A | 1737 | * | U | 1792 | A | 1793 | A | 1794 | A | 1795 | U | 1796 | G | 1797 | cWW | ncWB | cSH | tHS | cWW | |
| 2 | IL_5AJ0_071 | 5AJ0 | 0.1554 | 0 | A2 | LSU rRNA | C | 1714 | G | 1715 | G | 1716 | U | 1717 | A | 1718 | A | 1719 | * | U | 1774 | A | 1775 | A | 1776 | A | 1777 | U | 1778 | G | 1779 | cWW | cWB | cSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGUAA*UAAAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGUA*AAAU | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-bif-R-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.16 | Avg 0.08 | Max 0.16
Coloring options: