3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
UGC*GG
Length
5 nucleotides
Bulged bases
3J7P|1|5|G|1919
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_57598.1
Basepair signature
cWW-cWW
Number of instances in this motif group
400

Unit IDs

3J7P|1|5|U|1918
3J7P|1|5|G|1919
3J7P|1|5|C|1920
*
3J7P|1|5|G|2063
3J7P|1|5|G|2064

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain F
Ribosomal protein uL30
Chain M
Ribosomal protein eL14
Chain O
Ribosomal protein uL13
Chain S
Ribosomal protein eL20
Chain f
Ribosomal protein eL33

Coloring options:

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