IL_3J7P_078

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

3J7P|1|5|U|2305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02471.1

Basepair signature

cWW-tSS-L-tSH-tSS-tHS-tHS-cWW

Number of instances in this motif group

41

Unit IDs

3J7P|1|5|C|2302
3J7P|1|5|C|2303
3J7P|1|5|U|2304
3J7P|1|5|U|2305
3J7P|1|5|G|2306
3J7P|1|5|A|2307
3J7P|1|5|A|2308
3J7P|1|5|G|2309
*
3J7P|1|5|U|2329
3J7P|1|5|G|2330
3J7P|1|5|G|2331
3J7P|1|5|A|2332
3J7P|1|5|G|2333

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain C

Ribosomal protein uL4

Chain P

Ribosomal protein uL22

Chain Y

Ribosomal protein uL24

Chain e

Ribosomal protein eL32