IL_3J7P_096

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

3J7P|1|5|U|2880

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95863.1

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

15

Unit IDs

3J7P|1|5|C|2867
3J7P|1|5|G|2868
3J7P|1|5|U|2869
3J7P|1|5|A|2870
3J7P|1|5|A|2871
3J7P|1|5|C|2872
*
3J7P|1|5|G|2877
3J7P|1|5|G|2878
3J7P|1|5|A|2879
3J7P|1|5|U|2880
3J7P|1|5|A|2881
3J7P|1|5|A|2882
3J7P|1|5|G|2883

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain n

Ribosomal protein eL41

Chain p

Ribosomal protein eL43