IL_3J7P_152
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AUCUC*GAUCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7P_152 not in the Motif Atlas
- Homologous match to IL_7RQB_114
- Geometric discrepancy: 0.227
- The information below is about IL_7RQB_114
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.6
- Basepair signature
- cWW-cWS-L-tSW-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
3J7P|1|7|A|32
3J7P|1|7|U|33
3J7P|1|7|C|34
3J7P|1|7|U|35
3J7P|1|7|C|36
*
3J7P|1|7|G|41
3J7P|1|7|A|42
3J7P|1|7|U|43
3J7P|1|7|C|44
3J7P|1|7|U|45
Current chains
- Chain 7
- 5S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- Ribosomal protein uL18
- Chain J
- Ribosomal protein uL5
Coloring options: