IL_3J7P_292
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUGCG*CGCGCG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7P_292 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.337
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
3J7P|1|S2|C|1230
3J7P|1|S2|C|1231
3J7P|1|S2|U|1232
3J7P|1|S2|G|1233
3J7P|1|S2|C|1234
3J7P|1|S2|G|1235
*
3J7P|1|S2|C|1523
3J7P|1|S2|G|1524
3J7P|1|S2|C|1525
3J7P|1|S2|G|1526
3J7P|1|S2|C|1527
3J7P|1|S2|G|1528
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SQ
- Ribosomal protein uS9
- Chain SS
- Ribosomal protein uS13
- Chain ST
- Ribosomal protein eS19
- Chain SU
- Ribosomal protein uS10
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