IL_3J7Q_011
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCGCU*GGCG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_011 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3146
- The information below is about IL_1GID_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
3J7Q|1|5|C|180
3J7Q|1|5|C|181
3J7Q|1|5|G|182
3J7Q|1|5|C|183
3J7Q|1|5|U|184
*
3J7Q|1|5|G|253
3J7Q|1|5|G|254
3J7Q|1|5|C|255
3J7Q|1|5|G|256
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain h
- Ribosomal protein uL29
Coloring options: