IL_3J7Q_092
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_092 not in the Motif Atlas
- Homologous match to IL_5TBW_074
- Geometric discrepancy: 0.1333
- The information below is about IL_5TBW_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
3J7Q|1|5|A|2832
3J7Q|1|5|A|2833
3J7Q|1|5|C|2834
3J7Q|1|5|A|2835
3J7Q|1|5|A|2836
3J7Q|1|5|U|2837
3J7Q|1|5|G|2838
*
3J7Q|1|5|C|3850
3J7Q|1|5|U|3851
3J7Q|1|5|A|3852
3J7Q|1|5|U|3853
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain P
- Ribosomal protein uL22
- Chain d
- Ribosomal protein eL31
Coloring options: