IL_3J7R_191

3D structure

PDB id

3J7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the translating mammalian ribosome-Sec61 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

3J7R|1|S2|A|668

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J7R_191 not in the Motif Atlas

Homologous match to IL_4V88_416

Geometric discrepancy: 0.2057

The information below is about IL_4V88_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.3

Basepair signature

cWW-L-cWW-R-L-R

Number of instances in this motif group

5

Unit IDs

3J7R|1|S2|G|665
3J7R|1|S2|U|666
3J7R|1|S2|U|667
3J7R|1|S2|A|668
3J7R|1|S2|A|669
3J7R|1|S2|A|670
3J7R|1|S2|A|671
*
3J7R|1|S2|U|1161
3J7R|1|S2|C|1162

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SX

Ribosomal protein uS12

Chain Sa

Ribosomal protein eS26