IL_3J7R_207
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGGUUC*GUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_207 not in the Motif Atlas
- Geometric match to IL_8C3A_441
- Geometric discrepancy: 0.2331
- The information below is about IL_8C3A_441
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22198.1
- Basepair signature
- cWW-tSH-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
3J7R|1|S2|A|1042
3J7R|1|S2|G|1043
3J7R|1|S2|G|1044
3J7R|1|S2|U|1045
3J7R|1|S2|U|1046
3J7R|1|S2|C|1047
*
3J7R|1|S2|G|1071
3J7R|1|S2|U|1072
3J7R|1|S2|U|1073
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain A
- Ribosomal protein uL2
- Chain SO
- Ribosomal protein uS11
- Chain Sa
- Ribosomal protein eS26
- Chain p
- Ribosomal protein eL43
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