3D structure

PDB id
3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large ribosomal subunit from human mitochondria
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
AUC*GGUUU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_36670.1
Basepair signature
cWW-cWW-cSH-R-cWW
Number of instances in this motif group
9

Unit IDs

3J7Y|1|A|A|2946
3J7Y|1|A|U|2947
3J7Y|1|A|C|2948
*
3J7Y|1|A|G|2976
3J7Y|1|A|G|2977
3J7Y|1|A|U|2978
3J7Y|1|A|U|2979
3J7Y|1|A|U|2980

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
uL10
Chain N
uL16
Chain o
mL63

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0524 s