IL_3J8G_001

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CUG*CCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_001 not in the Motif Atlas

Geometric match to IL_5TBW_064

Geometric discrepancy: 0.3499

The information below is about IL_5TBW_064

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

3J8G|1|A|C|4
3J8G|1|A|U|5
3J8G|1|A|G|7
*
3J8G|1|A|C|113
3J8G|1|A|C|114
3J8G|1|A|A|115
3J8G|1|A|G|116

Current chains

Chain A

5S rRNA

Nearby chains

Chain O

50S ribosomal protein L18