IL_3J8G_013
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J8G_013 not in the Motif Atlas
- Geometric match to IL_7A0S_006
- Geometric discrepancy: 0.1933
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
3J8G|1|B|G|188
3J8G|1|B|G|189
3J8G|1|B|A|190
3J8G|1|B|A|191
3J8G|1|B|C|192
3J8G|1|B|U|193
3J8G|1|B|G|194
*
3J8G|1|B|C|201
3J8G|1|B|U|202
3J8G|1|B|A|203
3J8G|1|B|A|204
3J8G|1|B|G|205
3J8G|1|B|U|206
3J8G|1|B|A|207
3J8G|1|B|C|208
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain 6
- 50S ribosomal protein L34
- Chain 7
- 50S ribosomal protein L35
- Chain L
- 50S ribosomal protein L15
Coloring options: