IL_3J8G_057

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_057 not in the Motif Atlas

Homologous match to IL_7RQB_051

Geometric discrepancy: 0.2231

The information below is about IL_7RQB_051

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.6

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

14

Unit IDs

3J8G|1|B|C|1319
3J8G|1|B|C|1320
3J8G|1|B|A|1321
3J8G|1|B|A|1322
3J8G|1|B|C|1323
*
3J8G|1|B|G|1331
3J8G|1|B|G|1332
3J8G|1|B|G|1333

Current chains

Chain B

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L22