IL_3J8G_058

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_058 not in the Motif Atlas

Homologous match to IL_7RQB_052

Geometric discrepancy: 0.2114

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

3J8G|1|B|C|1351
3J8G|1|B|U|1352
3J8G|1|B|A|1353
3J8G|1|B|A|1354
3J8G|1|B|G|1355
*
3J8G|1|B|C|1376
3J8G|1|B|G|1377
3J8G|1|B|A|1378
3J8G|1|B|U|1379
3J8G|1|B|G|1380

Current chains

Chain B

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain C

50S ribosomal protein L2