IL_3J8G_063

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

3J8G|1|B|U|1554

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_063 not in the Motif Atlas

Geometric match to IL_4WF9_054

Geometric discrepancy: 0.3369

The information below is about IL_4WF9_054

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

3J8G|1|B|C|1437
3J8G|1|B|U|1438
3J8G|1|B|A|1439
3J8G|1|B|U|1440
*
3J8G|1|B|A|1551
3J8G|1|B|A|1552
3J8G|1|B|A|1553
3J8G|1|B|U|1554
3J8G|1|B|G|1555

Current chains

Chain B

23S rRNA

Nearby chains