IL_3J8G_091

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_091 not in the Motif Atlas

Geometric match to IL_6JQ6_004

Geometric discrepancy: 0.172

The information below is about IL_6JQ6_004

Detailed Annotation

Stack outside cWW

Broad Annotation

Stack outside cWW

Motif group

IL_66635.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

27

Unit IDs

3J8G|1|B|U|2401
3J8G|1|B|U|2402
3J8G|1|B|C|2403
*
3J8G|1|B|G|2414
3J8G|1|B|G|2415

Current chains

Chain B

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L35

Chain L

50S ribosomal protein L15