IL_3J8G_107

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

UU*ACUG

Length

6 nucleotides

Bulged bases

3J8G|1|B|C|2712, 3J8G|1|B|U|2713

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_107 not in the Motif Atlas

Homologous match to IL_7A0S_097

Geometric discrepancy: 0.1638

The information below is about IL_7A0S_097

Detailed Annotation

Multiple bulged bases

Broad Annotation

Multiple bulged bases

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

3J8G|1|B|U|2695
3J8G|1|B|U|2696
*
3J8G|1|B|A|2711
3J8G|1|B|C|2712
3J8G|1|B|U|2713
3J8G|1|B|G|2714

Current chains

Chain B

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19