IL_3J8G_125

3D structure

PDB id

3J8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGU*ACAG

Length

7 nucleotides

Bulged bases

3J8G|1|B|A|2602

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J8G_125 not in the Motif Atlas

Homologous match to IL_7A0S_092

Geometric discrepancy: 0.5168

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

3J8G|1|B|C|2591
3J8G|1|B|G|2592
3J8G|1|B|U|2593
*
3J8G|1|B|A|2600
3J8G|1|B|C|2601
3J8G|1|B|A|2602
3J8G|1|B|G|2603

Current chains

Chain B

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain X

GTPase Der