IL_3J9M_015
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAG*CUACC
- Length
- 8 nucleotides
- Bulged bases
- 3J9M|1|A|A|1986, 3J9M|1|A|U|1998, 3J9M|1|A|A|1999, 3J9M|1|A|C|2000
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9M_015 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.1031
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
3J9M|1|A|G|1985
3J9M|1|A|A|1986
3J9M|1|A|G|1987
*
3J9M|1|A|C|1997
3J9M|1|A|U|1998
3J9M|1|A|A|1999
3J9M|1|A|C|2000
3J9M|1|A|C|2001
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- bL34m
- Chain D
- uL2m
- Chain F
- uL4m
- Chain T
- uL22m
- Chain X
- bL28m
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