IL_3J9M_018

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUU*ACUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9M_018 not in the Motif Atlas

Geometric match to IL_5TBW_064

Geometric discrepancy: 0.3272

The information below is about IL_5TBW_064

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

3J9M|1|A|C|2046
3J9M|1|A|U|2047
3J9M|1|A|U|2048
*
3J9M|1|A|A|2091
3J9M|1|A|C|2092
3J9M|1|A|U|2093
3J9M|1|A|G|2094

Current chains

Chain A

16S rRNA

Nearby chains

Chain 3

bL35m

Chain 6

mL38

Chain M

uL15m

Chain g

mL49

Chain i

mL51