IL_3J9M_022
3D structure
- PDB id
- 3J9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome (class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAG*CAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9M_022 not in the Motif Atlas
- Geometric match to IL_2ZI0_001
- Geometric discrepancy: 0.2282
- The information below is about IL_2ZI0_001
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
3J9M|1|A|U|2168
3J9M|1|A|A|2169
3J9M|1|A|G|2170
*
3J9M|1|A|C|2190
3J9M|1|A|A|2191
3J9M|1|A|A|2192
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- uL10m
- Chain J
- uL11m
- Chain k
- mL53
- Chain l
- mL54
Coloring options: