IL_3J9M_096

3D structure

PDB id

3J9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome (class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAA*UAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75779.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

55

Unit IDs

3J9M|1|AA|C|1274
3J9M|1|AA|A|1275
3J9M|1|AA|A|1276
3J9M|1|AA|A|1277
*
3J9M|1|AA|U|1298
3J9M|1|AA|A|1299
3J9M|1|AA|A|1300
3J9M|1|AA|G|1301

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A1

mS35

Chain AB

uS2m

Chain AC

uS3m

Chain AD

uS5m

Chain AG

uS9m