IL_3J9W_028

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AAGAG*UGGU

Length

9 nucleotides

Bulged bases

3J9W|1|AA|A|674

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

116

Unit IDs

3J9W|1|AA|A|671
3J9W|1|AA|A|672
3J9W|1|AA|G|673
3J9W|1|AA|A|674
3J9W|1|AA|G|675
*
3J9W|1|AA|U|749
3J9W|1|AA|G|750
3J9W|1|AA|G|751
3J9W|1|AA|U|752

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AF

30S ribosomal protein bS6

Chain AO

30S ribosomal protein uS15

Chain AR

30S ribosomal protein bS18