IL_3J9W_041

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

3J9W|1|AA|C|1064

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71371.1

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

19

Unit IDs

3J9W|1|AA|U|1062
3J9W|1|AA|G|1063
3J9W|1|AA|C|1064
3J9W|1|AA|A|1065
3J9W|1|AA|U|1066
*
3J9W|1|AA|A|1213
3J9W|1|AA|U|1214
3J9W|1|AA|G|1215

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

30S ribosomal protein uS3

Chain AN

30S ribosomal protein uS14