IL_3J9W_103

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76337.1

Basepair signature

cWW-tWW-cSH-L-tWW-tWW-cSH-cWW

Number of instances in this motif group

6

Unit IDs

3J9W|1|BA|U|1064
3J9W|1|BA|U|1065
3J9W|1|BA|A|1066
3J9W|1|BA|A|1067
3J9W|1|BA|G|1068
3J9W|1|BA|U|1069
3J9W|1|BA|G|1070
*
3J9W|1|BA|C|1186
3J9W|1|BA|U|1187
3J9W|1|BA|A|1188
3J9W|1|BA|A|1189
3J9W|1|BA|A|1190

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B8

50S ribosomal protein bL36

Chain BH

50S ribosomal protein uL6

Chain BM

50S ribosomal protein uL13