IL_3J9W_110

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

AAGGG*CGCUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78231.1

Basepair signature

cWW-L-R-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

3J9W|1|BA|A|1243
3J9W|1|BA|A|1244
3J9W|1|BA|G|1245
3J9W|1|BA|G|1246
3J9W|1|BA|G|1247
*
3J9W|1|BA|C|1279
3J9W|1|BA|G|1280
3J9W|1|BA|C|1281
3J9W|1|BA|U|1282
3J9W|1|BA|U|1283

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein uL4

Chain BO

50S ribosomal protein uL15

Chain BT

50S ribosomal protein bL20