IL_3J9W_111

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

3J9W|1|BA|U|1251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02471.1

Basepair signature

cWW-tSS-L-tSH-tSS-tHS-tHS-cWW

Number of instances in this motif group

41

Unit IDs

3J9W|1|BA|C|1248
3J9W|1|BA|U|1249
3J9W|1|BA|G|1250
3J9W|1|BA|U|1251
3J9W|1|BA|G|1252
3J9W|1|BA|A|1253
3J9W|1|BA|A|1254
3J9W|1|BA|G|1255
*
3J9W|1|BA|U|1274
3J9W|1|BA|G|1275
3J9W|1|BA|G|1276
3J9W|1|BA|A|1277
3J9W|1|BA|G|1278

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein bL20