IL_3J9W_112

3D structure

PDB id

3J9W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAC*GAC

Length

6 nucleotides

Bulged bases

3J9W|1|BA|A|1260

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02315.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

103

Unit IDs

3J9W|1|BA|G|1259
3J9W|1|BA|A|1260
3J9W|1|BA|C|1261
*
3J9W|1|BA|G|1268
3J9W|1|BA|A|1269
3J9W|1|BA|C|1270

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BT

50S ribosomal protein bL20

Chain BU

50S ribosomal protein bL21