3D structure

PDB id
3J9W (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGAG*CGAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_75779.1
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
55

Unit IDs

3J9W|1|BA|C|2379
3J9W|1|BA|G|2380
3J9W|1|BA|A|2381
3J9W|1|BA|G|2382
*
3J9W|1|BA|C|2393
3J9W|1|BA|G|2394
3J9W|1|BA|A|2395
3J9W|1|BA|G|2396

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B7
50S ribosomal protein bL35
Chain BZ
50S ribosomal protein bL27

Coloring options:

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