IL_3J9W_195
3D structure
- PDB id
- 3J9W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 3J9W|1|AA|A|1403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9W_195 not in the Motif Atlas
- Homologous match to IL_4LFB_035
- Geometric discrepancy: 0.1732
- The information below is about IL_4LFB_035
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
3J9W|1|AA|G|932
3J9W|1|AA|A|933
*
3J9W|1|AA|U|1402
3J9W|1|AA|A|1403
3J9W|1|AA|C|1404
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein uS5
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