IL_3J9Z_020

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_020 not in the Motif Atlas

Geometric match to IL_5J7L_263

Geometric discrepancy: 0.1442

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

3J9Z|1|LA|U|703
3J9Z|1|LA|G|704
3J9Z|1|LA|A|705
3J9Z|1|LA|A|706
3J9Z|1|LA|G|707
*
3J9Z|1|LA|U|724
3J9Z|1|LA|G|725
3J9Z|1|LA|G|726
3J9Z|1|LA|A|727
3J9Z|1|LA|G|728

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LN

50S ribosomal protein L2