IL_3J9Z_026

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUC*GAAU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_026 not in the Motif Atlas

Geometric match to IL_4P3T_002

Geometric discrepancy: 0.262

The information below is about IL_4P3T_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01472.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

3J9Z|1|LA|A|849
3J9Z|1|LA|U|850
3J9Z|1|LA|C|851
*
3J9Z|1|LA|G|926
3J9Z|1|LA|A|927
3J9Z|1|LA|A|928
3J9Z|1|LA|U|929

Current chains

Chain LA

23S ribosomal RNA

Nearby chains

Chain LY

50S ribosomal protein L30