IL_3J9Z_085
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAUG*CUUUA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_085 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3919
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3J9Z|1|LA|U|2106
3J9Z|1|LA|G|2107
3J9Z|1|LA|A|2108
3J9Z|1|LA|U|2109
3J9Z|1|LA|G|2110
*
3J9Z|1|LA|C|2179
3J9Z|1|LA|U|2180
3J9Z|1|LA|U|2181
3J9Z|1|LA|U|2182
3J9Z|1|LA|A|2183
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
- Chain LC
- 50S ribosomal protein L1
- Chain S7
- Transfer RNA; tRNA
Coloring options: