IL_3J9Z_113
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUCCC*GAAAC
- Length
- 11 nucleotides
- Bulged bases
- 3J9Z|1|LB|U|25
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_113 not in the Motif Atlas
- Homologous match to IL_7A0S_103
- Geometric discrepancy: 0.2092
- The information below is about IL_7A0S_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_18472.5
- Basepair signature
- cWW-tSW-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
3J9Z|1|LB|G|23
3J9Z|1|LB|G|24
3J9Z|1|LB|U|25
3J9Z|1|LB|C|26
3J9Z|1|LB|C|27
3J9Z|1|LB|C|28
*
3J9Z|1|LB|G|56
3J9Z|1|LB|A|57
3J9Z|1|LB|A|58
3J9Z|1|LB|A|59
3J9Z|1|LB|C|60
Current chains
- Chain LB
- 5S ribosomal RNA
Nearby chains
- Chain L7
- 50S ribosomal protein L5
- Chain LK
- 50S ribosomal protein L18
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