IL_3J9Z_114

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CC*GAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_114 not in the Motif Atlas

Homologous match to IL_8P9A_366

Geometric discrepancy: 0.5754

The information below is about IL_8P9A_366

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87975.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

10

Unit IDs

3J9Z|1|LB|C|30
3J9Z|1|LB|C|31
*
3J9Z|1|LB|G|51
3J9Z|1|LB|A|52
3J9Z|1|LB|A|53
3J9Z|1|LB|G|54

Current chains

Chain LB

5S ribosomal RNA

Nearby chains

Chain L7

50S ribosomal protein L5

Chain LK

50S ribosomal protein L18