IL_3J9Z_128
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 3J9Z|1|SA|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_128 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1449
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
3J9Z|1|SA|G|147
3J9Z|1|SA|G|148
3J9Z|1|SA|A|149
3J9Z|1|SA|U|150
3J9Z|1|SA|A|151
3J9Z|1|SA|A|152
3J9Z|1|SA|C|153
*
3J9Z|1|SA|G|168
3J9Z|1|SA|C|169
3J9Z|1|SA|U|170
3J9Z|1|SA|A|171
3J9Z|1|SA|A|172
3J9Z|1|SA|U|173
3J9Z|1|SA|A|174
3J9Z|1|SA|C|175
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain ST
- 30S ribosomal protein S20
Coloring options: