IL_3J9Z_138
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_138 not in the Motif Atlas
- Homologous match to IL_4LFB_019
- Geometric discrepancy: 0.5204
- The information below is about IL_4LFB_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31561.1
- Basepair signature
- cWW-L-R-tWH-tWH-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
3J9Z|1|SA|G|450
3J9Z|1|SA|A|451
3J9Z|1|SA|A|452
3J9Z|1|SA|G|453
3J9Z|1|SA|G|454
3J9Z|1|SA|G|455
*
3J9Z|1|SA|C|477
3J9Z|1|SA|A|478
3J9Z|1|SA|U|479
3J9Z|1|SA|U|480
3J9Z|1|SA|G|481
3J9Z|1|SA|A|482
3J9Z|1|SA|C|483
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SP
- 30S ribosomal protein S16
Coloring options: