IL_3J9Z_139
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGUAA*UUUGCU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_139 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3595
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3J9Z|1|SA|A|456
3J9Z|1|SA|G|457
3J9Z|1|SA|U|458
3J9Z|1|SA|A|459
3J9Z|1|SA|A|460
*
3J9Z|1|SA|U|471
3J9Z|1|SA|U|472
3J9Z|1|SA|U|473
3J9Z|1|SA|G|474
3J9Z|1|SA|C|475
3J9Z|1|SA|U|476
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SP
- 30S ribosomal protein S16
Coloring options: