IL_3J9Z_142
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 3J9Z|1|SA|A|532, 3J9Z|1|SA|U|534
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J9Z_142 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.4143
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
3J9Z|1|SA|G|515
3J9Z|1|SA|U|516
3J9Z|1|SA|G|517
3J9Z|1|SA|C|518
3J9Z|1|SA|C|519
3J9Z|1|SA|A|520
3J9Z|1|SA|G|521
*
3J9Z|1|SA|C|528
3J9Z|1|SA|G|529
3J9Z|1|SA|G|530
3J9Z|1|SA|U|531
3J9Z|1|SA|A|532
3J9Z|1|SA|A|533
3J9Z|1|SA|U|534
3J9Z|1|SA|A|535
3J9Z|1|SA|C|536
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain S1
- Elongation factor G
- Chain SC
- 30S ribosomal protein S3
- Chain SL
- 30S ribosomal protein S12
Coloring options: