IL_3J9Z_205

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUAAC*GAGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_205 not in the Motif Atlas

Geometric match to IL_8VTW_108

Geometric discrepancy: 0.3308

The information below is about IL_8VTW_108

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49093.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

3J9Z|1|SA|U|1444
3J9Z|1|SA|U|1445
3J9Z|1|SA|A|1446
3J9Z|1|SA|A|1447
3J9Z|1|SA|C|1448
*
3J9Z|1|SA|G|1455
3J9Z|1|SA|A|1456
3J9Z|1|SA|G|1457
3J9Z|1|SA|G|1458

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain ST

30S ribosomal protein S20